Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CA_C2364 | CA_C2385 | CA_C2364 | CA_C2385 | Uncharacterized protein, homolog of gi|2274936 Eubacterium acidaminophilum. | Hypothetical protein. | 0.652 |
CA_C2364 | CA_C2707 | CA_C2364 | CA_C2707 | Uncharacterized protein, homolog of gi|2274936 Eubacterium acidaminophilum. | 8-oxoguanine-DNA-glycosylase. | 0.720 |
CA_C2364 | CA_C3588 | CA_C2364 | CA_C3588 | Uncharacterized protein, homolog of gi|2274936 Eubacterium acidaminophilum. | DNA replication protein DnaC. | 0.511 |
CA_C2385 | CA_C2364 | CA_C2385 | CA_C2364 | Hypothetical protein. | Uncharacterized protein, homolog of gi|2274936 Eubacterium acidaminophilum. | 0.652 |
CA_C2385 | CA_C2707 | CA_C2385 | CA_C2707 | Hypothetical protein. | 8-oxoguanine-DNA-glycosylase. | 0.581 |
CA_C2385 | CA_C3588 | CA_C2385 | CA_C3588 | Hypothetical protein. | DNA replication protein DnaC. | 0.728 |
CA_C2706 | CA_C2707 | CA_C2706 | CA_C2707 | Uncharacterized conserved membrane protein, DedA family. | 8-oxoguanine-DNA-glycosylase. | 0.793 |
CA_C2706 | bcd | CA_C2706 | CA_C2711 | Uncharacterized conserved membrane protein, DedA family. | Butyryl-CoA dehydrogenase; Belongs to the acyl-CoA dehydrogenase family. | 0.459 |
CA_C2706 | hbd | CA_C2706 | CA_C2708 | Uncharacterized conserved membrane protein, DedA family. | Beta-hydroxybutyryl-CoA dehydrogenase, NAD-dependent; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.576 |
CA_C2707 | CA_C2364 | CA_C2707 | CA_C2364 | 8-oxoguanine-DNA-glycosylase. | Uncharacterized protein, homolog of gi|2274936 Eubacterium acidaminophilum. | 0.720 |
CA_C2707 | CA_C2385 | CA_C2707 | CA_C2385 | 8-oxoguanine-DNA-glycosylase. | Hypothetical protein. | 0.581 |
CA_C2707 | CA_C2706 | CA_C2707 | CA_C2706 | 8-oxoguanine-DNA-glycosylase. | Uncharacterized conserved membrane protein, DedA family. | 0.793 |
CA_C2707 | CA_C3588 | CA_C2707 | CA_C3588 | 8-oxoguanine-DNA-glycosylase. | DNA replication protein DnaC. | 0.567 |
CA_C2707 | bcd | CA_C2707 | CA_C2711 | 8-oxoguanine-DNA-glycosylase. | Butyryl-CoA dehydrogenase; Belongs to the acyl-CoA dehydrogenase family. | 0.575 |
CA_C2707 | dinB | CA_C2707 | CA_C0285 | 8-oxoguanine-DNA-glycosylase. | DNA-damage repair protein, dinP/uvrX ortholog; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.564 |
CA_C2707 | exoA | CA_C2707 | CA_C0222 | 8-oxoguanine-DNA-glycosylase. | Exodeoxyribonuclease (exoA). | 0.836 |
CA_C2707 | hbd | CA_C2707 | CA_C2708 | 8-oxoguanine-DNA-glycosylase. | Beta-hydroxybutyryl-CoA dehydrogenase, NAD-dependent; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.663 |
CA_C2707 | polA | CA_C2707 | CA_C1098 | 8-oxoguanine-DNA-glycosylase. | DNA polymerase I, polA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.696 |
CA_C2707 | pyrB | CA_C2707 | CA_C2654 | 8-oxoguanine-DNA-glycosylase. | Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.675 |
CA_C3588 | CA_C2364 | CA_C3588 | CA_C2364 | DNA replication protein DnaC. | Uncharacterized protein, homolog of gi|2274936 Eubacterium acidaminophilum. | 0.511 |
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