STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comBUncharacterized conserved protein, YITC B.subtilis ortholog; Belongs to the ComB family. (235 aa)    
Predicted Functional Partners:
CA_C3232
Hypothetical protein.
  
    0.628
CA_C3236
Possible transcriptional regulator from YAEG/LRPR family.
       0.500
msmX
Multiple sugar-binding ABC-transporter, MSMX ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.497
CA_C3234
Uncharacterized conserved protein, YVBJ B.subtilis ortholog with N-terminal C4-type Zn-finger domain.
       0.491
CA_C0566
Malate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
  
   
 0.470
CA_C3238
Ucharacterized Fe-S oxidoreductase.
       0.470
mntP
Predicted membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
   
    0.451
purQ/purL
Phosphoribosylformylglycinamidine (FGAM) synthase; Bifunctional enzyme; synthetase domain/glutamine amidotransferase domain.
       0.446
CA_C3241
Uncharacterized conserved membrane protein, YYAD B.subtilis ortholog.
 
     0.443
CA_C3235
Uncharacterized conserved protein, YVBJ B.subtilis homolog.
       0.432
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.