STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA_C3355Polyketide synthase pksE (short-chain alcohol dehydrogenase,acyl-carrier-protein S-malonyltransferase,3-oxoacyl-(acyl-carrier-protein) synthase I domains). (1795 aa)    
Predicted Functional Partners:
CA_C1022
Thioesterase II of alpha/beta hydrolase superfamily.
  
 0.998
CA_C2019
Malonyl CoA-acyl carrier protein transacylase.
 
 0.992
fadB-2
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.980
CA_C2006
Enzyme of siderophore/surfactin biosynthesis; Belongs to the P-Pant transferase superfamily.
 
 0.976
CA_C2014
Predicted esterase.
  
 
 0.974
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
0.971
CA_C1329
Surfactin biosynthesis-related protein, SFP; Belongs to the P-Pant transferase superfamily.
 
 0.969
CA_C3330
Cytochrome P450 family protein, YBDT B.subtilis ortholog.
  
 0.962
fabZ
Hydroxymyristoyl-(acyl carrier protein) dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
 
 
 0.928
CA_C0814
3-oxoacyl-[acyl-carrier-protein] synthase III.
  
  
 0.915
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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