STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CopZPutative heavy-metal transport/detoxification protein; Experimentally verified as part of mature spore proteome PMID:19542279. (70 aa)    
Predicted Functional Partners:
CAJ69000.1
Putative copper-transporting P-type ATPase.
 
 
 0.897
CAJ67135.1
Putative K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporting P-type ATPase.
  
 
 0.846
CAJ67423.1
Putative ATPase, P-type, heavy metal translocating.
  
 
 0.845
EcsC
Conserved hypothetical protein.
  
 
 0.840
CsoR
Conserved hypothetical protein.
  
  
 0.733
polA
DNA polymerase I (POLI); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
   0.682
CAJ67380.1
Transcriptional regulator, beta-lactams repressor.
  
  
 0.607
cdu1
Transcriptional regulator, beta-lactams repressor.
  
  
 0.607
blaI
Transcriptional regulator, Penicillinase repressor.
  
  
 0.606
coaE
Dephospho-CoA kinase (Dephosphocoenzyme A kinase); Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.597
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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