STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ68223.1Putative phage XkdM-like protein. (142 aa)    
Predicted Functional Partners:
CAJ68222.1
Putative phage XkdK-like protein.
 
  
 0.978
CAJ68227.1
Putative phage XkdP-like protein.
 
    0.886
CAJ68232.1
Putative phage XkdT-like protein.
 
    0.883
CAJ68230.1
Putative phage XkdS-like protein.
 
    0.846
CAJ68231.1
Putative baseplate assembly predicted J-like.
 
    0.843
CAJ68221.1
Conserved hypothetical protein.
  
    0.772
CAJ67805.1
Putative phage baseplate assembly protein.
 
    0.745
CAJ69790.1
Putative phage tail protein.
 
     0.733
CAJ68224.1
Putative phage XkdN-like protein.
  
    0.654
CAJ67804.1
Putative phage protein.
 
    0.566
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.