STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ70234.1Putative cell wall hydrolase Tn916-like,CTn6-Orf13. (334 aa)    
Predicted Functional Partners:
CAJ70235.1
Putative membrane protein Tn916-like,CTn6-Orf14.
 
  
 0.953
CAJ70233.1
Putative conjugative transposon protein Tn916-like, CTn6-Orf12.
 
   0.947
CAJ70236.1
Putative ATPase Tn916-like, CTn6-Orf15.
 
    0.935
CAJ70237.1
Putative conjugative transposon protein Tn916-like, CTn6-Orf16.
 
    0.882
CAJ67334.1
Putative membrane protein Tn5397, CTn3-Orf15.
 
  
 0.869
CAJ67958.1
Putative conjugative transposon protein Tn1549-like, CTn4-Orf11.
 
 
    0.863
CAJ70238.1
Putative antirestriction protein Tn916-like,CTn6-Orf17.
 
    0.841
CAJ67333.1
Putative ATPase Tn5397, CTn3-Orf16.
 
  
 0.832
CAJ67337.1
Putative conjugative transposon protein Tn5397,CTn3-Orf13.
 
   0.805
CAJ67193.1
Putative conjugative transposon protein Tn916-like, CTn1-Orf16.
 
   0.801
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.