Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
glpQ2 | phoD | rrnAC1917 | rrnAC0273 | Glycerophosphoryl diester phosphodiesterase. | Alkaline phosphatase D. | 0.459 |
glpQ2 | rrnAC2380 | rrnAC1917 | rrnAC2380 | Glycerophosphoryl diester phosphodiesterase. | Putative serine/threonine phosphatase. | 0.433 |
hisD | phoD | rrnAC0272 | rrnAC0273 | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | Alkaline phosphatase D. | 0.415 |
hisD | rrnAC0274 | rrnAC0272 | rrnAC0274 | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | Putative HesB-like protein. | 0.570 |
hisD | rrnAC0524 | rrnAC0272 | rrnAC0524 | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | Putative sec-independent transolcation prot. | 0.414 |
mptD | phoD | rrnAC2306 | rrnAC0273 | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | Alkaline phosphatase D. | 0.900 |
ndk | phoD | rrnAC0106 | rrnAC0273 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | Alkaline phosphatase D. | 0.457 |
ndk | rrnAC0274 | rrnAC0106 | rrnAC0274 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | Putative HesB-like protein. | 0.457 |
phoD | glpQ2 | rrnAC0273 | rrnAC1917 | Alkaline phosphatase D. | Glycerophosphoryl diester phosphodiesterase. | 0.459 |
phoD | hisD | rrnAC0273 | rrnAC0272 | Alkaline phosphatase D. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.415 |
phoD | mptD | rrnAC0273 | rrnAC2306 | Alkaline phosphatase D. | Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | 0.900 |
phoD | ndk | rrnAC0273 | rrnAC0106 | Alkaline phosphatase D. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.457 |
phoD | ptpS | rrnAC0273 | rrnAC2166 | Alkaline phosphatase D. | 6-pyruvoyl tetrahydropterin synthase. | 0.901 |
phoD | rrnAC0274 | rrnAC0273 | rrnAC0274 | Alkaline phosphatase D. | Putative HesB-like protein. | 0.586 |
phoD | rrnAC0524 | rrnAC0273 | rrnAC0524 | Alkaline phosphatase D. | Putative sec-independent transolcation prot. | 0.401 |
phoD | rrnAC2380 | rrnAC0273 | rrnAC2380 | Alkaline phosphatase D. | Putative serine/threonine phosphatase. | 0.600 |
phoD | rrnAC3411 | rrnAC0273 | rrnAC3411 | Alkaline phosphatase D. | Metal dependent amidohydrolase superfamily protein. | 0.452 |
ptpS | phoD | rrnAC2166 | rrnAC0273 | 6-pyruvoyl tetrahydropterin synthase. | Alkaline phosphatase D. | 0.901 |
rrnAC0274 | hisD | rrnAC0274 | rrnAC0272 | Putative HesB-like protein. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.570 |
rrnAC0274 | ndk | rrnAC0274 | rrnAC0106 | Putative HesB-like protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.457 |
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