STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpdB32'3'-cyclic-nucleotide 2'-phosphodiesterase. (454 aa)    
Predicted Functional Partners:
cpdB2
2'3'-cyclic-nucleotide 2'-phosphodiesterase.
  
  
 
0.924
iunH2
Inosine-uridine preferring nucleoside hydrolase.
  
 
  0.917
surE
Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.917
udp1
Uridine phosphorylase.
 
  
  0.916
cdd
Cytidine deaminase.
    
 0.914
udp2
Uridine phosphorylase.
    
  0.905
rrnAC0281
Unknown.
       0.583
tmk
Thymidylate kinase.
 
    0.548
rrnAC3378
5-formyltetrahydrofolate cyclo-ligase.
   
    0.463
tmpC
Membrane protein C; 35 kDa antigen; lipoprotein TpN35.
 
  
 0.427
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.