Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
argH | asd | rrnAC2681 | rrnAC0365 | Argininosuccinate lyase. | Aspartate-semialdehyde dehydrogenase. | 0.825 |
argH | dapA1 | rrnAC2681 | rrnAC0207 | Argininosuccinate lyase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.597 |
argH | dapA2 | rrnAC2681 | rrnAC0960 | Argininosuccinate lyase. | Dihydrodipicolinate synthase. | 0.593 |
argH | dapB | rrnAC2681 | rrnAC0206 | Argininosuccinate lyase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.769 |
argH | hom | rrnAC2681 | rrnAC2408 | Argininosuccinate lyase. | Homoserine dehydrogenase. | 0.705 |
argH | lysC | rrnAC2681 | rrnAC2663 | Argininosuccinate lyase. | Aspartokinase; Belongs to the aspartokinase family. | 0.566 |
argH | odc | rrnAC2681 | rrnAC0198 | Argininosuccinate lyase. | Ornithine decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.835 |
argH | prr | rrnAC2681 | rrnAC2470 | Argininosuccinate lyase. | Proline racemase. | 0.725 |
argH | thrB | rrnAC2681 | rrnAC3348 | Argininosuccinate lyase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.477 |
asd | argH | rrnAC0365 | rrnAC2681 | Aspartate-semialdehyde dehydrogenase. | Argininosuccinate lyase. | 0.825 |
asd | dapA1 | rrnAC0365 | rrnAC0207 | Aspartate-semialdehyde dehydrogenase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.969 |
asd | dapA2 | rrnAC0365 | rrnAC0960 | Aspartate-semialdehyde dehydrogenase. | Dihydrodipicolinate synthase. | 0.969 |
asd | dapB | rrnAC0365 | rrnAC0206 | Aspartate-semialdehyde dehydrogenase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.926 |
asd | dapD | rrnAC0365 | rrnAC0204 | Aspartate-semialdehyde dehydrogenase. | 23,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase. | 0.814 |
asd | hom | rrnAC0365 | rrnAC2408 | Aspartate-semialdehyde dehydrogenase. | Homoserine dehydrogenase. | 0.991 |
asd | lysC | rrnAC0365 | rrnAC2663 | Aspartate-semialdehyde dehydrogenase. | Aspartokinase; Belongs to the aspartokinase family. | 0.998 |
asd | odc | rrnAC0365 | rrnAC0198 | Aspartate-semialdehyde dehydrogenase. | Ornithine decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.811 |
asd | prr | rrnAC0365 | rrnAC2470 | Aspartate-semialdehyde dehydrogenase. | Proline racemase. | 0.929 |
asd | thrB | rrnAC0365 | rrnAC3348 | Aspartate-semialdehyde dehydrogenase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.856 |
dapA1 | argH | rrnAC0207 | rrnAC2681 | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Argininosuccinate lyase. | 0.597 |
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