STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exoMSuccinoglycan biosynthesis protein. (324 aa)    
Predicted Functional Partners:
tot
Transmembrane oligosaccharyl transferase.
     
 0.915
lpg3
LPS glycosyltransferase.
     
 0.913
rrnAC0427
Putative polysaccharide biosynthesis protein.
  
   
 0.763
gtl
Glycosyl transferase-like.
 
   
 0.740
ugd2
UDP-glucose 6-dehydrogenase.
  
   
 0.739
gtr-2
Predicted glycosyltransferase.
 
   
 0.673
rffH3
Glucose-1-phosphate thymidylyltransferase.
      
 0.659
rrnAC0443
Unknown.
      
 0.654
lgtD
Glycosyl transferase.
 
   
 0.620
dpm2
dolichyl-P-glucose synthetase.
 
   
 0.470
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.