STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htlD-5HTR-like protein; Similar to Escherichia coli protien kinase GP:GI-606149. (461 aa)    
Predicted Functional Partners:
araL1
Arabinose operon protein AraL.
       0.669
rrnAC0486
Unknown.
       0.552
hlx1
HoxA-like transcriptional regulator.
  
     0.540
pip
Putative intracellular protease.
       0.499
rrnAC2694
Unknown.
  
     0.475
hlx2
HoxA-like transcriptional regulator.
  
     0.473
hlx5
HoxA-like transcriptional regulator.
  
     0.472
rre-1
Response regulator receiver.
 
   
 0.443
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.