Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dnaG | nac-2 | rrnAC1720 | rrnAC0214 | dnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Unknown; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | 0.746 |
| dnaG | rpl18E | rrnAC1720 | rrnAC0064 | dnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 50S ribosomal protein L18e; Stabilizes the tertiary rRNA structure within the 23S rRNA domain (domain II) to which it binds; Belongs to the eukaryotic ribosomal protein eL18 family. | 0.764 |
| dnaG | rrnAC0258 | rrnAC1720 | rrnAC0258 | dnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Unknown. | 0.754 |
| dnaG | rrnAC0535 | rrnAC1720 | rrnAC0535 | dnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | HTH DNA-binding protein. | 0.686 |
| dnaG | rrnAC0629 | rrnAC1720 | rrnAC0629 | dnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Unknown. | 0.710 |
| dnaG | rrnAC0857 | rrnAC1720 | rrnAC0857 | dnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Unknown; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family. | 0.675 |
| dnaG | rrnAC2479 | rrnAC1720 | rrnAC2479 | dnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Unknown. | 0.668 |
| dnaG | rrnAC3318 | rrnAC1720 | rrnAC3318 | dnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Unknown; Involved in DNA damage repair. | 0.627 |
| nac-2 | dnaG | rrnAC0214 | rrnAC1720 | Unknown; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | dnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.746 |
| nac-2 | rpl18E | rrnAC0214 | rrnAC0064 | Unknown; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | 50S ribosomal protein L18e; Stabilizes the tertiary rRNA structure within the 23S rRNA domain (domain II) to which it binds; Belongs to the eukaryotic ribosomal protein eL18 family. | 0.993 |
| nac-2 | rrnAC0258 | rrnAC0214 | rrnAC0258 | Unknown; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | Unknown. | 0.711 |
| nac-2 | rrnAC0535 | rrnAC0214 | rrnAC0535 | Unknown; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | HTH DNA-binding protein. | 0.662 |
| nac-2 | rrnAC0629 | rrnAC0214 | rrnAC0629 | Unknown; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | Unknown. | 0.662 |
| nac-2 | rrnAC0857 | rrnAC0214 | rrnAC0857 | Unknown; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | Unknown; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family. | 0.699 |
| nac-2 | rrnAC2479 | rrnAC0214 | rrnAC2479 | Unknown; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | Unknown. | 0.679 |
| nac-2 | rrnAC3318 | rrnAC0214 | rrnAC3318 | Unknown; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | Unknown; Involved in DNA damage repair. | 0.491 |
| rpl18E | dnaG | rrnAC0064 | rrnAC1720 | 50S ribosomal protein L18e; Stabilizes the tertiary rRNA structure within the 23S rRNA domain (domain II) to which it binds; Belongs to the eukaryotic ribosomal protein eL18 family. | dnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.764 |
| rpl18E | nac-2 | rrnAC0064 | rrnAC0214 | 50S ribosomal protein L18e; Stabilizes the tertiary rRNA structure within the 23S rRNA domain (domain II) to which it binds; Belongs to the eukaryotic ribosomal protein eL18 family. | Unknown; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | 0.993 |
| rpl18E | rrnAC0258 | rrnAC0064 | rrnAC0258 | 50S ribosomal protein L18e; Stabilizes the tertiary rRNA structure within the 23S rRNA domain (domain II) to which it binds; Belongs to the eukaryotic ribosomal protein eL18 family. | Unknown. | 0.742 |
| rpl18E | rrnAC0535 | rrnAC0064 | rrnAC0535 | 50S ribosomal protein L18e; Stabilizes the tertiary rRNA structure within the 23S rRNA domain (domain II) to which it binds; Belongs to the eukaryotic ribosomal protein eL18 family. | HTH DNA-binding protein. | 0.928 |
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