STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysHPhospho-adenylyl-sulfate Reductase. (325 aa)    
Predicted Functional Partners:
cysG2
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.948
cysT1
Sulfate transport system permease protein.
  
  
 0.937
sseA1
Thiosulfate sulfurtransferase.
    
 0.929
sseA2
Thiosulfate sulfurtransferase.
    
 0.929
nirA2
Ferredoxin-nitrite reductase.
 
  
 0.885
nirA1
Ferredoxin-nitrite reductase.
 
  
 0.882
hemX
uroporphyrin-III C-methyltransferase.
 
  
 0.881
metB
Cystathionine gamma-synthase.
  
  
 0.758
rrnAC1289
Chelatase.
 
  
 0.684
cysE2
Serine acetyltransferase.
     
 0.681
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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