STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC0726Unknown. (411 aa)    
Predicted Functional Partners:
carS
Unknown; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
  
  
 0.926
etfB2
Electron transfer flavoprotein beta subunit.
 
 
 0.658
rrnAC0727
ATP-NAD kinase.
       0.625
cobN
Cobalamin biosynthesis protein.
 
  
 0.617
etfB1
Electron transfer flavoprotein beta subunit.
  
 
 0.586
etfA1
Electron transfer flavoprotein alpha subunit.
 
 
 0.567
rrnAC0725
Unknown.
       0.556
rrnAC0728
Unknown.
       0.517
etfA2
Electron transfer flavoprotein alpha-subunit.
  
 
 0.495
fdfT
Farnesyl-diphosphate farnesyltransferase.
 
  
 0.477
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.