STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC0803Unknown. (514 aa)    
Predicted Functional Partners:
rrnAC0802
Unknown.
       0.585
rrnAC0805
Unknown.
       0.551
tnp-11
Transposase.
  
     0.509
rrnB0181
Unknown.
  
     0.495
yidJ
Putative sulfatase.
 
     0.494
rrnAC0423
Arylsulfatase.
 
     0.488
rrnAC1892
DSBA-like thioredoxin domain.
  
     0.483
rrnAC0426
Putative sulfatase.
 
     0.468
rrnAC1443
Unknown.
  
     0.435
rrnAC0858
Arylsulfatase.
  
     0.410
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.