STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC0924Unknown. (358 aa)    
Predicted Functional Partners:
rrnAC3337
Putative transcriptional regulator.
  
   
 0.673
cga-2
Glucan 14-alpha-glucosidase; Glucoamylase.
  
     0.659
rrnAC0376
Transcription regulator.
  
     0.634
yajO2
Oxidoreductase aldo/keto reductase family.
       0.618
boa-8
Bat-like protein; Similar to halobacterium Bat (bacterio-opsin activatior-like protein).
  
     0.585
rbsB-2
Sugar ABC transporter substrate binding protein.
 
     0.579
rrnAC0538
Unknown.
  
     0.563
rrnAC0930
Unknown.
 
    0.554
rrnAC2254
Unknown.
  
     0.533
rrnAC1351
Putative sugar transporter.
  
     0.529
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.