STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC0955Unknown. (560 aa)    
Predicted Functional Partners:
rrnAC0956
Unknown.
 
  
0.979
cobN
Cobalamin biosynthesis protein.
  
    0.710
cobW1
Cobalamin synthesis protein/P47K.
  
    0.697
rrnAC0957
Unknown.
       0.559
bioF
8-amino-7-oxononanoate synthase.
  
    0.527
rrnAC1140
Unknown.
  
    0.481
sppA
Putative signal peptide peptidase SppA.
  
    0.470
sppA-2
Protease IV-like.
  
    0.470
edp
Proteinase IV-like.
  
    0.470
birA
biotin-(acetyl-CoA carboxylase) ligase.
       0.457
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.