STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aor3Flavin-containing amine-oxidoreductase. (344 aa)    
Predicted Functional Partners:
rrnAC0969
Unknown.
       0.679
phr2
Cryptochrome/photolyase.
 
     0.665
hypE
Hydrogenase expression/formation protein.
       0.557
rrnAC3504
Flavin-containing amine-oxidoreductase.
 
   
 0.471
rrnAC2806
Unknown.
       0.457
csg4
Cell surface glycoprotein related protein; S-layer protein related protein.
       0.424
rrnAC0318
Putative carotenoid biosynthesis protein.
 
     0.419
rrnAC3079
Unknown.
  
     0.418
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.