Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gtr-4 | gtr-5 | rrnAC1350 | rrnAC1352 | Putative sugar transferase. | Glycosyltransferase. | 0.598 |
gtr-4 | gtr-7 | rrnAC1350 | rrnAC1015 | Putative sugar transferase. | Glycosyltransferase. | 0.636 |
gtr-4 | rfbA | rrnAC1350 | rrnAC2343 | Putative sugar transferase. | Glucose-1-phosphate thymidylyltransferase. | 0.468 |
gtr-4 | rrnAC0427 | rrnAC1350 | rrnAC0427 | Putative sugar transferase. | Putative polysaccharide biosynthesis protein. | 0.595 |
gtr-4 | rrnAC1013 | rrnAC1350 | rrnAC1013 | Putative sugar transferase. | Unknown. | 0.610 |
gtr-4 | rrnAC2273 | rrnAC1350 | rrnAC2273 | Putative sugar transferase. | Unknown. | 0.700 |
gtr-4 | rrnAC2505 | rrnAC1350 | rrnAC2505 | Putative sugar transferase. | Putative polysaccharide biosynthesis protein. | 0.534 |
gtr-4 | ugd2 | rrnAC1350 | rrnAC3239 | Putative sugar transferase. | UDP-glucose 6-dehydrogenase. | 0.666 |
gtr-5 | gtr-4 | rrnAC1352 | rrnAC1350 | Glycosyltransferase. | Putative sugar transferase. | 0.598 |
gtr-5 | gtr-7 | rrnAC1352 | rrnAC1015 | Glycosyltransferase. | Glycosyltransferase. | 0.684 |
gtr-5 | rfbA | rrnAC1352 | rrnAC2343 | Glycosyltransferase. | Glucose-1-phosphate thymidylyltransferase. | 0.519 |
gtr-5 | rrnAC0427 | rrnAC1352 | rrnAC0427 | Glycosyltransferase. | Putative polysaccharide biosynthesis protein. | 0.596 |
gtr-5 | rrnAC1013 | rrnAC1352 | rrnAC1013 | Glycosyltransferase. | Unknown. | 0.593 |
gtr-5 | rrnAC2273 | rrnAC1352 | rrnAC2273 | Glycosyltransferase. | Unknown. | 0.700 |
gtr-5 | rrnAC2505 | rrnAC1352 | rrnAC2505 | Glycosyltransferase. | Putative polysaccharide biosynthesis protein. | 0.534 |
gtr-5 | ugd2 | rrnAC1352 | rrnAC3239 | Glycosyltransferase. | UDP-glucose 6-dehydrogenase. | 0.694 |
gtr-7 | gtr-4 | rrnAC1015 | rrnAC1350 | Glycosyltransferase. | Putative sugar transferase. | 0.636 |
gtr-7 | gtr-5 | rrnAC1015 | rrnAC1352 | Glycosyltransferase. | Glycosyltransferase. | 0.684 |
gtr-7 | lpg2 | rrnAC1015 | rrnAC1017 | Glycosyltransferase. | LPS glycosyltransferase. | 0.534 |
gtr-7 | lpg3 | rrnAC1015 | rrnAC0429 | Glycosyltransferase. | LPS glycosyltransferase. | 0.544 |
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