STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katG2Peroxidase/catalase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity. (757 aa)    
Predicted Functional Partners:
hisC2
Histidinol-phosphate aminotransferase.
  
 
 0.945
aspC3
Aspartate aminotransferase.
  
 
 0.936
aspB2
Aspartate aminotransferase.
  
 
 0.936
aspC1
Aspartate aminotransferase.
  
 
 0.936
katG1
Peroxidase/catalase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
  
  
0.901
metB
Cystathionine gamma-synthase.
  
 
 0.848
pheA
Prephenate dehydratase.
    
 0.832
metE
5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase.
  
 
 0.820
rrnAC0255
Methionine synthase vitamin-B12 independent.
  
 
 0.820
folA1
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis (By similarity).
     
 0.738
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.