STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC1263Unknown. (297 aa)    
Predicted Functional Partners:
noxA2
NADH oxidase.
   
 0.583
rrnB0281
Unknown.
   
 0.583
rrnAC2152
Putative rhodanese.
  
 
 0.467
pqsH
Fad-dependent monooxygenase.
 
    0.446
fbr1
Cytochrome-like protein Fbr.
  
     0.434
entB2
Isochorismatase.
 
 
 0.432
acdH
acyl-CoA dehydrogenase.
 
   0.418
araC
Transcriptional regulator AraC family.
 
 
 
 0.416
pcbD-1
Hydrolase alpha/beta hydrolase fold family.
 
 
 0.408
adh9
Alcohol dehydrogenase.
  
 
 0.401
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.