STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
virB11Type IV secretion system protein. (254 aa)    
Predicted Functional Partners:
rrnAC1846
Unknown.
      0.944
rrnAC1249
Unknown.
 
  
 0.670
rrnAC0464
Unknown.
 
  
 0.657
gspE1
Type II secretion system protein.
  
     0.641
fapJ
Flagella accessory protein J.
 
  
 0.594
rrnAC1845
Unknown.
       0.526
rrnAC1844
Unknown.
       0.489
rrnAC1849
Unknown.
 
     0.485
flaG
Putative flagella-related protein G.
  
  
 0.443
flpH
Flagella-related protein H.
  
  
 0.435
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.