STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hbd23-hydroxybutyryl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. (654 aa)    
Predicted Functional Partners:
acaB3
3-ketoacyl-CoA thiolase.
  
 0.974
aca2
acetyl-coA acetyltransferase.
 
 0.973
yqeF
acetyl-coA acetyltransferase.
 
 0.973
aca1
acetyl-coA acetyltransferase.
 
 0.973
acaB2
3-ketoacyl-CoA thiolase.
  
 0.973
acaB1
3-ketoacyl-CoA thiolase.
  
 0.973
ech4
enoyl-CoA hydratase.
 
0.945
hbd1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 
0.904
acaB4
3-ketoacyl-CoA thiolase.
  
 
 0.745
phaC
Poly(3-hydroxyalkanoate) synthase; Involved in the production of polyhydroxyalkonic acids (PHAs), which are water-insoluble biopolymers used as intracellular energy reserve material when cells grow under conditions of nutrient limitation. PHAs are composed primarily of 3-hydroxybutyric acid (3HB) and 3-hydroxyvaleric acid (3HV). Required for the production of poly- beta-hydroxybutyrate (PHB) and poly(beta-hydroxybutyrate-co-beta- hydroxyvalerate) (PHBV); Belongs to the PHA/PHB synthase family.
      
 0.734
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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