STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sseA2Thiosulfate sulfurtransferase. (297 aa)    
Predicted Functional Partners:
sseA1
Thiosulfate sulfurtransferase.
 
  
 
0.973
cysH
Phospho-adenylyl-sulfate Reductase.
    
 0.929
doxD1
Terminal quinol oxidase.
  
 
 0.916
aspC3
Aspartate aminotransferase.
     
 0.910
aspB2
Aspartate aminotransferase.
     
 0.910
aspC1
Aspartate aminotransferase.
     
 0.910
metB
Cystathionine gamma-synthase.
  
 
 0.873
cysK2
Cysteine synthase.
  
 
 0.863
cysK1
Cysteine synthase.
  
 
 0.863
seb
Selenium-binding protein.
  
  
  0.828
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.