STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppFDipeptide ABC transporter ATP-binding. (890 aa)    
Predicted Functional Partners:
oppC1
Oligopeptide transport system permease protein OppC.
 
 0.997
oppC2
Oligopeptide transport system permease protein OppC.
 
 0.994
oppC
Oligopeptide ABC transporter permease protein.
 
 0.993
dppB1
Dipeptide ABC transporter permease.
 
 
 0.990
dppB
Dipeptide ABC transporter permease.
 
 
 0.982
dppD
Dipeptide ABC transporter ATP-binding.
 
 
 0.979
oppB
Oligopeptide ABC transporter permease protein.
 
 
 0.971
dppA
Dipeptide ABC transporter dipeptide-binding.
 
 
 0.969
oppA
Oligopeptide ABC transporter solute-binding protein.
  
 
 0.927
rrnAC2226
Unknown.
       0.746
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.