STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
norBCytochrome B subunit of nitric oxide reductase. (760 aa)    
Predicted Functional Partners:
nosZ
Nitrous-oxide reductase.
 
 
 0.998
nirK
Nitrite reductase copper containing protein.
 
  
 0.989
narG
Nitrate reductase alpha chain.
 
   
 0.818
narH
Nitrate reductase beta chain.
 
  
 0.715
hcp5
Halocyanin precursor-like.
 
   
 0.704
rrnAC1656
Nitrite/nitrate reduction protein.
   
  
 0.691
hcp7
Halocyanin precursor-like.
 
   
 0.691
hcp8
Halocyanin precursor-like.
 
   
 0.688
hcp3
Halocyanin precursor-like.
 
   
 0.687
hcp1
Halocyanin precursor-like.
 
   
 0.666
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.