STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
doxDioxgenase. (329 aa)    
Predicted Functional Partners:
estA
Phospholipase/carboxylesterase.
 
     0.823
nolD
NADH dehydrogenase/oxidoreductase-like protein.
  
  
 0.719
sdhC
Succinate dehydrogenase subunit C.
  
  
 0.634
rrnAC2275
Unknown.
       0.627
coaD1
Phosphopantetheine adenylyltransferase.
       0.578
ndHG5
NADH dehydrogenase/oxidoreductase.
  
  
 0.531
nuoC
NADH dehydrogenase I chain C D.
  
  
 0.531
sdhB
Succinate dehydrogenase iron-sulfur protein subunit.
  
  
 0.482
rrnAC0733
Rieske [2Fe-2S] domain protein.
  
    0.465
petA
Putative rieske iron-sulfur protein.
  
    0.465
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.