STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amyAlpha amylase. (695 aa)    
Predicted Functional Partners:
malE1
Maltose ABC transporter maltose-binding protein.
 
  
 0.902
cat
Cationic amino acid transporter.
  
 0.837
cat-2
Cationic amino acid transporter.
  
 0.837
yhdG
Amino acid transporter.
  
 0.837
malFG-6
ABC-type sugar transport systems permease components.
 
  
 0.824
malG
Maltose ABC transporter permease protein.
 
  
 0.785
flaB
Flagellin B precursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
   
 0.726
icd
Isocitrate dehydrogenase.
   
  
 0.719
arsR
Transcription regulator.
      
 0.664
adh2
Alcohol dehydrogenase.
   
  
 0.657
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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