STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prxSAhpC/TSA family peroxiredoxins PrxS. (169 aa)    
Predicted Functional Partners:
gst2
Glutathione S-transferase.
 
   
 0.899
yrdC
DNA binding protein.
     
 0.873
rrnAC2600
Unknown.
       0.749
rrnAC1786
HTH DNA-binding protein.
  
     0.703
gapB
Glyceraldehyde 3-phosphate dehydrogenase.
  
  
 0.687
top1
Topoisomerase DNA binding C4 zinc finger.
  
     0.684
rrnAC0639
Acetyltransferase family; GNAT.
  
     0.646
recJ4
RecJ-like exonuclease; DHH/DHHA1 family protein.
  
     0.620
uvrB
Putative uvrB.
 
   
 0.601
uvrD
Repair helicase.
 
   
 0.599
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.