STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
inbOxidoreductase-like. (247 aa)    
Predicted Functional Partners:
ywfD1
Glucose 1-dehydrogenase.
 
  
 0.770
fabG2
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.759
ort
Orotate phosphoribosyltransferase.
       0.587
yqjQ
Oxidoreductase short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.484
panF
Pantothenate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.467
citZ
Citrate synthase II.
  
    0.467
yusM
Proline dehydrogenase.
   
    0.465
gabD
Succinate-semialdehyde dehydrogenase.
 
  
 0.444
sec11b
Signal sequence peptidase.
  
    0.405
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.