STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htr6MCP domain signal transducer; Membrane protein. (776 aa)    
Predicted Functional Partners:
cheW1
Chemotaxis protein CheW.
 
 
 0.887
cheW2
Chemotaxis signal transduction protein CheW.
 
 
 0.885
cheR
Chemotaxis protein methyltransferase CheR.
 
 
 0.865
cheB
Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.845
tmpC
Membrane protein C; 35 kDa antigen; lipoprotein TpN35.
  
    0.804
cheA3
Chemotaxis protein CheA.
 
  
 0.797
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
   0.690
sop1
Sensory rhodopsin I; Photoattractant rhodopsin; Belongs to the archaeal/bacterial/fungal opsin family.
  
 
 0.551
cheY
Chemotaxis protein CheY.
 
 
 0.536
cheA2
CHEA histidine kinase; Chemotaxis protein.
 
 
 0.503
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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