Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| apl | gfo1 | rrnAC0265 | rrnAC2929 | AP-endonuclease/AP-lyase. | Glucose-fructose oxidoreductase. | 0.781 |
| apl | gfo6 | rrnAC0265 | rrnAC3034 | AP-endonuclease/AP-lyase. | Xylose dehydrogenase; NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan. In addition to D-xylose, oxidizes D-ribose at similar kinetic constants, whereas D-glucose is oxidized with about 70-fold lower catalytic efficiency. | 0.781 |
| apl | rrnAC1721 | rrnAC0265 | rrnAC1721 | AP-endonuclease/AP-lyase. | Unknown. | 0.657 |
| apl | yjlD3 | rrnAC0265 | rrnAC3251 | AP-endonuclease/AP-lyase. | NADH dehydrogenase. | 0.814 |
| dgoA2 | gfo6 | rrnAC3032 | rrnAC3034 | Mandelate racemase/muconate lactonizing enzyme family protein. | Xylose dehydrogenase; NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan. In addition to D-xylose, oxidizes D-ribose at similar kinetic constants, whereas D-glucose is oxidized with about 70-fold lower catalytic efficiency. | 0.818 |
| dgoA2 | hpcEb | rrnAC3032 | rrnAC3039 | Mandelate racemase/muconate lactonizing enzyme family protein. | 2-hydroxyhepta-24-diene-1,7-dioate isomerase. | 0.663 |
| dgoA2 | malE1 | rrnAC3032 | rrnAC2349 | Mandelate racemase/muconate lactonizing enzyme family protein. | Maltose ABC transporter maltose-binding protein. | 0.620 |
| dgoA2 | malG | rrnAC3032 | rrnAC2346 | Mandelate racemase/muconate lactonizing enzyme family protein. | Maltose ABC transporter permease protein. | 0.600 |
| dgoA2 | pfk4 | rrnAC3032 | rrnAC0342 | Mandelate racemase/muconate lactonizing enzyme family protein. | 1-phosphofructokinase. | 0.600 |
| dgoA2 | rrnAC3033 | rrnAC3032 | rrnAC3033 | Mandelate racemase/muconate lactonizing enzyme family protein. | Metallo-beta-lactamase. | 0.645 |
| gfo1 | apl | rrnAC2929 | rrnAC0265 | Glucose-fructose oxidoreductase. | AP-endonuclease/AP-lyase. | 0.781 |
| gfo1 | gfo6 | rrnAC2929 | rrnAC3034 | Glucose-fructose oxidoreductase. | Xylose dehydrogenase; NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan. In addition to D-xylose, oxidizes D-ribose at similar kinetic constants, whereas D-glucose is oxidized with about 70-fold lower catalytic efficiency. | 0.943 |
| gfo1 | rrnAC1721 | rrnAC2929 | rrnAC1721 | Glucose-fructose oxidoreductase. | Unknown. | 0.753 |
| gfo1 | yjlD3 | rrnAC2929 | rrnAC3251 | Glucose-fructose oxidoreductase. | NADH dehydrogenase. | 0.612 |
| gfo6 | apl | rrnAC3034 | rrnAC0265 | Xylose dehydrogenase; NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan. In addition to D-xylose, oxidizes D-ribose at similar kinetic constants, whereas D-glucose is oxidized with about 70-fold lower catalytic efficiency. | AP-endonuclease/AP-lyase. | 0.781 |
| gfo6 | dgoA2 | rrnAC3034 | rrnAC3032 | Xylose dehydrogenase; NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan. In addition to D-xylose, oxidizes D-ribose at similar kinetic constants, whereas D-glucose is oxidized with about 70-fold lower catalytic efficiency. | Mandelate racemase/muconate lactonizing enzyme family protein. | 0.818 |
| gfo6 | gfo1 | rrnAC3034 | rrnAC2929 | Xylose dehydrogenase; NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan. In addition to D-xylose, oxidizes D-ribose at similar kinetic constants, whereas D-glucose is oxidized with about 70-fold lower catalytic efficiency. | Glucose-fructose oxidoreductase. | 0.943 |
| gfo6 | hpcEb | rrnAC3034 | rrnAC3039 | Xylose dehydrogenase; NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan. In addition to D-xylose, oxidizes D-ribose at similar kinetic constants, whereas D-glucose is oxidized with about 70-fold lower catalytic efficiency. | 2-hydroxyhepta-24-diene-1,7-dioate isomerase. | 0.596 |
| gfo6 | malE1 | rrnAC3034 | rrnAC2349 | Xylose dehydrogenase; NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan. In addition to D-xylose, oxidizes D-ribose at similar kinetic constants, whereas D-glucose is oxidized with about 70-fold lower catalytic efficiency. | Maltose ABC transporter maltose-binding protein. | 0.625 |
| gfo6 | malG | rrnAC3034 | rrnAC2346 | Xylose dehydrogenase; NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan. In addition to D-xylose, oxidizes D-ribose at similar kinetic constants, whereas D-glucose is oxidized with about 70-fold lower catalytic efficiency. | Maltose ABC transporter permease protein. | 0.592 |
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