STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argDCPyruvoyl-dependent arginine decarboxylase. (156 aa)    
Predicted Functional Partners:
arg2
Arginase; Belongs to the arginase family.
    
 0.920
arg1
Arginase; Belongs to the arginase family.
    
 0.920
speB1
Agmatinase; Belongs to the arginase family.
    
 0.920
argH
Argininosuccinate lyase.
     
  0.800
rrnAC3200
Unknown.
       0.746
pkn-2
Putative cell surface protein OR serine/threonine protein kinase-related protein.
       0.634
mvaA
3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family.
  
   
 0.568
dhs
Probable deoxyhypusine synthase 1.
     
 0.508
rrnAC3178
Unknown.
  
     0.482
purO
Unknown; Catalyzes the cyclization of 5-formylamidoimidazole-4- carboxamide ribonucleotide to IMP.
  
     0.478
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.