STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galE7UDP-glucose 4-epimerase. (331 aa)    
Predicted Functional Partners:
galE5
UDP-glucose 4-epimerase.
 
    
0.884
sqdB
UDP-sulfoquinovose synthase.
 
    
0.868
rfbB1
dTDP-glucose 4-6-dehydratase.
  
     0.668
rfbB2
DTDP-glucose-46-dehydratase.
  
     0.663
rrnAC3242
Unknown.
       0.623
galE10
UDP-glucose 4-epimerase.
  
     0.547
rrnAC3247
Unknown.
       0.486
rrnAC3240
Putative membrane-bound metal-dependent hydrolase.
       0.438
rrnAC3241
Unknown.
       0.438
sacB
Levansucrase; Belongs to the glycosyl hydrolase 68 family.
  
     0.430
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.