STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htr-10MCP domain signal transducer; Transduces signals from the phototaxis receptor sensory rhodopsin I (Sop1). (431 aa)    
Predicted Functional Partners:
cheR
Chemotaxis protein methyltransferase CheR.
  
  
 0.982
cheB
Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.981
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
  
  0.960
cheA3
Chemotaxis protein CheA.
  
  
 0.956
sop1
Sensory rhodopsin I; Photoattractant rhodopsin; Belongs to the archaeal/bacterial/fungal opsin family.
 
  
 0.941
cheW1
Chemotaxis protein CheW.
  
  
 0.937
cheW2
Chemotaxis signal transduction protein CheW.
  
  
 0.936
cheY
Chemotaxis protein CheY.
  
  
 0.930
cheA1
CheA histidine kinase; Chemotaxis protein.
  
  
  0.839
sop2
Sensory rhodopsin 1; Mediates the photorepellent response.
  
  
 0.814
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.