STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnCAlkylphosphonate ABC transporter; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (257 aa)    
Predicted Functional Partners:
LBA0151
Alkylphosphonate ABC transporter.
 
 
 0.996
LBA0154
Phosphonate ABC transporter.
 
 0.996
LBA0153
Alkylphosphonate ABC transporter.
 
 0.995
LBA0014
Putative alkylphosphonate ABC transporter.
 
 
 0.984
ecfA1
ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
    
0.900
LBA1674
Amino acid ABC transporter permease protein.
 
    0.795
LBA0575
ABC transporter ATP-binding and permease protein.
 
     
0.776
LBA1499
ABC transporter; Potential frameshift to 1500.
 
    
0.632
yfkN
2',3'-cyclic-nucleotide 2'-phosphodiesterase; Belongs to the 5'-nucleotidase family.
 
   
 0.596
LBA1277
ABC transporter ATP binding and permease protein.
 
     
0.589
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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