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yugC protein (Lactococcus lactis Il1403) - STRING interaction network
"yugC" - Dehydrogenase in Lactococcus lactis Il1403
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yugCDehydrogenase; EVIDENCE BY HOMOLOGY BIO06.01 ENERGY METABOLISM. Aerobic (325 aa)    
Predicted Functional Partners:
nadR
EVIDENCE BY HOMOLOGY BIO09.01 REGULATORY FUNCTIONS. General. BELONGS TO THE NADR FAMILY OF TRANSCRIPTIONAL REGULATORS (379 aa)
              0.865
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (365 aa)
   
 
  0.805
ypaI
Oxidoreductase; EVIDENCE BY HOMOLOGY BIO06.01 ENERGY METABOLISM. Aerobic. short-chain dehydrogenase, evidenced by COGnitor. There are twelve paralogs in L.lactis; Belongs to the short-chain dehydrogenases/reductases (SDR) family (259 aa)
 
   
  0.622
ypjF
Oxidoreductase; EVIDENCE BY HOMOLOGY BIO06.01 ENERGY METABOLISM. Aerobic. there are four paralogs in L.lactis (324 aa)
 
   
  0.620
cbr
Carbonyl reductase; EVIDENCE BY HOMOLOGY BIO06.01 ENERGY METABOLISM. Aerobic. belongs to the short-chain dehydrogenases/reductases family (261 aa)
 
     
  0.598
ypjA
Dehydrogenase; EVIDENCE BY HOMOLOGY BIO06.01 ENERGY METABOLISM. Aerobic. similar to several alcohol dehydrogenases (348 aa)
   
 
  0.590
ribA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family (398 aa)
     
   
  0.585
yrjC
Iron-binding oxidase subunit; EVIDENCE BY HOMOLOGY BIO06.01 ENERGY METABOLISM. Aerobic. similar to several iron-binding oxidase subunit proteins (490 aa)
         
  0.564
yrfB
NADH-dependent oxidoreductase; EVIDENCE BY HOMOLOGY BIO06.01 ENERGY METABOLISM. Aerobic (391 aa)
         
  0.548
yphC
Oxidoreductase; EVIDENCE BY HOMOLOGY BIO06.01 ENERGY METABOLISM. Aerobic. high homology to many hypothetical oxidoreductases; Belongs to the short-chain dehydrogenases/reductases (SDR) family (281 aa)
         
  0.545
Your Current Organism:
Lactococcus lactis Il1403
NCBI taxonomy Id: 272623
Other names: L. lactis subsp. lactis Il1403, Lactococcus lactis Il1403, Lactococcus lactis subsp. lactis Il1403, Lactococcus lactis subsp. lactis str. Il1403, Lactococcus lactis subsp. lactis strain Il1403
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