Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cmr | lpg0541 | lpg1405 | lpg0541 | Multidrug translocase MdfA, chloramphenicol resistance pump Cmr. | Probable membrane protein YdgA-like. | 0.501 |
| cmr | lpg2399 | lpg1405 | lpg2399 | Multidrug translocase MdfA, chloramphenicol resistance pump Cmr. | Hypothetical virulence protein. | 0.430 |
| cmr | pagP | lpg1405 | lpg0025 | Multidrug translocase MdfA, chloramphenicol resistance pump Cmr. | Rcp; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.634 |
| icmF | lpg0541 | lpg0458 | lpg0541 | IcmF. | Probable membrane protein YdgA-like. | 0.724 |
| icmF | lpg2399 | lpg0458 | lpg2399 | IcmF. | Hypothetical virulence protein. | 0.658 |
| icmF | pagP | lpg0458 | lpg0025 | IcmF. | Rcp; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.496 |
| lpg0024 | lpg0026 | lpg0024 | lpg0026 | Hemin binding protein Hbp. | Amino acid permease. | 0.426 |
| lpg0024 | pagP | lpg0024 | lpg0025 | Hemin binding protein Hbp. | Rcp; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.548 |
| lpg0026 | lpg0024 | lpg0026 | lpg0024 | Amino acid permease. | Hemin binding protein Hbp. | 0.426 |
| lpg0026 | pagP | lpg0026 | lpg0025 | Amino acid permease. | Rcp; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.577 |
| lpg0541 | cmr | lpg0541 | lpg1405 | Probable membrane protein YdgA-like. | Multidrug translocase MdfA, chloramphenicol resistance pump Cmr. | 0.501 |
| lpg0541 | icmF | lpg0541 | lpg0458 | Probable membrane protein YdgA-like. | IcmF. | 0.724 |
| lpg0541 | pagP | lpg0541 | lpg0025 | Probable membrane protein YdgA-like. | Rcp; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.626 |
| lpg0635 | lpg2463 | lpg0635 | lpg2463 | Melitin resistance protein. | Peptide aspartate b-dioxygenase. | 0.643 |
| lpg0635 | lpxK-2 | lpg0635 | lpg1818 | Melitin resistance protein. | Tetraacyl disaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.669 |
| lpg0635 | pagP | lpg0635 | lpg0025 | Melitin resistance protein. | Rcp; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.756 |
| lpg2399 | cmr | lpg2399 | lpg1405 | Hypothetical virulence protein. | Multidrug translocase MdfA, chloramphenicol resistance pump Cmr. | 0.430 |
| lpg2399 | icmF | lpg2399 | lpg0458 | Hypothetical virulence protein. | IcmF. | 0.658 |
| lpg2399 | pagP | lpg2399 | lpg0025 | Hypothetical virulence protein. | Rcp; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.505 |
| lpg2463 | lpg0635 | lpg2463 | lpg0635 | Peptide aspartate b-dioxygenase. | Melitin resistance protein. | 0.643 |
page 1 of 2