Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cyoE | lpg0409 | lpg0412 | lpg0409 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Hypothetical, SURF1 family. | 0.966 |
cyoE | lpg0410 | lpg0412 | lpg0410 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Hypothetical protein. | 0.863 |
cyoE | lpg0411 | lpg0412 | lpg0411 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome c oxidase assembly protein. | 0.998 |
cyoE | lpg0413 | lpg0412 | lpg0413 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Hypothetical, SCO1/SenC family protein. | 0.902 |
cyoE | rimK | lpg0412 | lpg0414 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Glutathione synthase, ribosomal protein S6 modification protein. | 0.460 |
lpg0085 | rimK | lpg0085 | lpg0414 | Hypothetical protein. | Glutathione synthase, ribosomal protein S6 modification protein. | 0.714 |
lpg0409 | cyoE | lpg0409 | lpg0412 | Hypothetical, SURF1 family. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.966 |
lpg0409 | lpg0410 | lpg0409 | lpg0410 | Hypothetical, SURF1 family. | Hypothetical protein. | 0.923 |
lpg0409 | lpg0411 | lpg0409 | lpg0411 | Hypothetical, SURF1 family. | Cytochrome c oxidase assembly protein. | 0.993 |
lpg0409 | lpg0413 | lpg0409 | lpg0413 | Hypothetical, SURF1 family. | Hypothetical, SCO1/SenC family protein. | 0.916 |
lpg0409 | rimK | lpg0409 | lpg0414 | Hypothetical, SURF1 family. | Glutathione synthase, ribosomal protein S6 modification protein. | 0.460 |
lpg0410 | cyoE | lpg0410 | lpg0412 | Hypothetical protein. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.863 |
lpg0410 | lpg0409 | lpg0410 | lpg0409 | Hypothetical protein. | Hypothetical, SURF1 family. | 0.923 |
lpg0410 | lpg0411 | lpg0410 | lpg0411 | Hypothetical protein. | Cytochrome c oxidase assembly protein. | 0.908 |
lpg0410 | lpg0413 | lpg0410 | lpg0413 | Hypothetical protein. | Hypothetical, SCO1/SenC family protein. | 0.846 |
lpg0410 | rimK | lpg0410 | lpg0414 | Hypothetical protein. | Glutathione synthase, ribosomal protein S6 modification protein. | 0.460 |
lpg0411 | cyoE | lpg0411 | lpg0412 | Cytochrome c oxidase assembly protein. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.998 |
lpg0411 | lpg0409 | lpg0411 | lpg0409 | Cytochrome c oxidase assembly protein. | Hypothetical, SURF1 family. | 0.993 |
lpg0411 | lpg0410 | lpg0411 | lpg0410 | Cytochrome c oxidase assembly protein. | Hypothetical protein. | 0.908 |
lpg0411 | lpg0413 | lpg0411 | lpg0413 | Cytochrome c oxidase assembly protein. | Hypothetical, SCO1/SenC family protein. | 0.947 |
page 1 of 2