Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bcp | lpg0521 | lpg2212 | lpg0521 | Acetylpolyamine aminohydolase. | Hypothetical protein. | 0.773 |
bcp | pdxB | lpg2212 | lpg0918 | Acetylpolyamine aminohydolase. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.731 |
bcp | rplF | lpg2212 | lpg0344 | Acetylpolyamine aminohydolase. | 50S ribosomal protein L6/(L9E); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.734 |
bcp | udk | lpg2212 | lpg1165 | Acetylpolyamine aminohydolase. | Uridine kinase. | 0.773 |
bcp | udk-2 | lpg2212 | lpg1853 | Acetylpolyamine aminohydolase. | Uridine kinase. | 0.773 |
gap | lpg0521 | lpg0138 | lpg0521 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Hypothetical protein. | 0.902 |
gap | lpg0947 | lpg0138 | lpg0947 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 2-oxoglutarate ferredoxin oxidoreductase alpha subunit. | 0.406 |
gap | lpg2581 | lpg0138 | lpg2581 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.779 |
gap | pdxB | lpg0138 | lpg0918 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.696 |
gap | udk | lpg0138 | lpg1165 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Uridine kinase. | 0.902 |
gap | udk-2 | lpg0138 | lpg1853 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Uridine kinase. | 0.902 |
lpg0521 | bcp | lpg0521 | lpg2212 | Hypothetical protein. | Acetylpolyamine aminohydolase. | 0.773 |
lpg0521 | gap | lpg0521 | lpg0138 | Hypothetical protein. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.902 |
lpg0521 | pdxB | lpg0521 | lpg0918 | Hypothetical protein. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.802 |
lpg0521 | udk | lpg0521 | lpg1165 | Hypothetical protein. | Uridine kinase. | 0.513 |
lpg0521 | udk-2 | lpg0521 | lpg1853 | Hypothetical protein. | Uridine kinase. | 0.610 |
lpg0919 | pdxB | lpg0919 | lpg0918 | Transmembrane protein. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.800 |
lpg0947 | gap | lpg0947 | lpg0138 | 2-oxoglutarate ferredoxin oxidoreductase alpha subunit. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.406 |
lpg0947 | lpg2581 | lpg0947 | lpg2581 | 2-oxoglutarate ferredoxin oxidoreductase alpha subunit. | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.792 |
lpg0947 | pdxB | lpg0947 | lpg0918 | 2-oxoglutarate ferredoxin oxidoreductase alpha subunit. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.709 |
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