Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cyaA | lpg1323 | lpg1322 | lpg1323 | Adenylate cyclase 1 protein. | Drug resistance transporter, Bcr/CflA. | 0.511 |
cyaA | lpg1525 | lpg1322 | lpg1525 | Adenylate cyclase 1 protein. | CAAX amino terminal protease family protein. | 0.752 |
cyaA | lpg1912 | lpg1322 | lpg1912 | Adenylate cyclase 1 protein. | Sensory box histidine kinase/response regulator. | 0.822 |
cyaA | lpg2125 | lpg1322 | lpg2125 | Adenylate cyclase 1 protein. | Hypothetical protein; Transport and binding. | 0.757 |
cyaA | lpg2146 | lpg1322 | lpg2146 | Adenylate cyclase 1 protein. | Response regulator TutC. | 0.778 |
cyaA | lpg2180 | lpg1322 | lpg2180 | Adenylate cyclase 1 protein. | Sensory box histidine kinase/response regulator. | 0.889 |
cyaA | lpg2181 | lpg1322 | lpg2181 | Adenylate cyclase 1 protein. | Sensory box sensor histidine kinase/response regulator, putative. | 0.693 |
cyaA | lpg2485 | lpg1322 | lpg2485 | Adenylate cyclase 1 protein. | TPR domain protein. | 0.721 |
cyaA | lpg2998 | lpg1322 | lpg2998 | Adenylate cyclase 1 protein. | Sulfate transporter. | 0.815 |
cyaA | pleD | lpg1322 | lpg0230 | Adenylate cyclase 1 protein. | Sensor histidine kinase. | 0.756 |
lpg1323 | cyaA | lpg1323 | lpg1322 | Drug resistance transporter, Bcr/CflA. | Adenylate cyclase 1 protein. | 0.511 |
lpg1525 | cyaA | lpg1525 | lpg1322 | CAAX amino terminal protease family protein. | Adenylate cyclase 1 protein. | 0.752 |
lpg1525 | lpg1912 | lpg1525 | lpg1912 | CAAX amino terminal protease family protein. | Sensory box histidine kinase/response regulator. | 0.831 |
lpg1525 | lpg2125 | lpg1525 | lpg2125 | CAAX amino terminal protease family protein. | Hypothetical protein; Transport and binding. | 0.664 |
lpg1525 | lpg2146 | lpg1525 | lpg2146 | CAAX amino terminal protease family protein. | Response regulator TutC. | 0.533 |
lpg1525 | lpg2180 | lpg1525 | lpg2180 | CAAX amino terminal protease family protein. | Sensory box histidine kinase/response regulator. | 0.878 |
lpg1525 | pleD | lpg1525 | lpg0230 | CAAX amino terminal protease family protein. | Sensor histidine kinase. | 0.401 |
lpg1912 | cyaA | lpg1912 | lpg1322 | Sensory box histidine kinase/response regulator. | Adenylate cyclase 1 protein. | 0.822 |
lpg1912 | lpg1525 | lpg1912 | lpg1525 | Sensory box histidine kinase/response regulator. | CAAX amino terminal protease family protein. | 0.831 |
lpg1912 | lpg2125 | lpg1912 | lpg2125 | Sensory box histidine kinase/response regulator. | Hypothetical protein; Transport and binding. | 0.803 |
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