Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cyaA-2 | fixL | lpg1490 | lpg0278 | Adenylate cyclase PLUS two component hybrid sensor and regulator. | Sensor histidine kinase. | 0.896 |
cyaA-2 | lpg0277 | lpg1490 | lpg0277 | Adenylate cyclase PLUS two component hybrid sensor and regulator. | Sensory box protein, GGDEF family protein, LssE. | 0.883 |
cyaA-2 | lpg0891 | lpg1490 | lpg0891 | Adenylate cyclase PLUS two component hybrid sensor and regulator. | Sensory box protein/GGDEF/EAL domains. | 0.888 |
cyaA-2 | lpg1114 | lpg1490 | lpg1114 | Adenylate cyclase PLUS two component hybrid sensor and regulator. | Sensory box protein (GGDEF domain/EAL domain). | 0.889 |
cyaA-2 | lpg1357 | lpg1490 | lpg1357 | Adenylate cyclase PLUS two component hybrid sensor and regulator. | Inner membrane protein PLUS sensory box protein LssE. | 0.898 |
cyaA-2 | lpg1912 | lpg1490 | lpg1912 | Adenylate cyclase PLUS two component hybrid sensor and regulator. | Sensory box histidine kinase/response regulator. | 0.980 |
cyaA-2 | lpg2132 | lpg1490 | lpg2132 | Adenylate cyclase PLUS two component hybrid sensor and regulator. | Sensory box/GGDEF family protein. | 0.944 |
cyaA-2 | lpg2146 | lpg1490 | lpg2146 | Adenylate cyclase PLUS two component hybrid sensor and regulator. | Response regulator TutC. | 0.923 |
cyaA-2 | lpg2180 | lpg1490 | lpg2180 | Adenylate cyclase PLUS two component hybrid sensor and regulator. | Sensory box histidine kinase/response regulator. | 0.961 |
cyaA-2 | lpg2181 | lpg1490 | lpg2181 | Adenylate cyclase PLUS two component hybrid sensor and regulator. | Sensory box sensor histidine kinase/response regulator, putative. | 0.893 |
fixL | cyaA-2 | lpg0278 | lpg1490 | Sensor histidine kinase. | Adenylate cyclase PLUS two component hybrid sensor and regulator. | 0.896 |
fixL | lpg0277 | lpg0278 | lpg0277 | Sensor histidine kinase. | Sensory box protein, GGDEF family protein, LssE. | 0.998 |
fixL | lpg0891 | lpg0278 | lpg0891 | Sensor histidine kinase. | Sensory box protein/GGDEF/EAL domains. | 0.832 |
fixL | lpg1114 | lpg0278 | lpg1114 | Sensor histidine kinase. | Sensory box protein (GGDEF domain/EAL domain). | 0.878 |
fixL | lpg1357 | lpg0278 | lpg1357 | Sensor histidine kinase. | Inner membrane protein PLUS sensory box protein LssE. | 0.832 |
fixL | lpg1912 | lpg0278 | lpg1912 | Sensor histidine kinase. | Sensory box histidine kinase/response regulator. | 0.996 |
fixL | lpg2132 | lpg0278 | lpg2132 | Sensor histidine kinase. | Sensory box/GGDEF family protein. | 0.888 |
fixL | lpg2146 | lpg0278 | lpg2146 | Sensor histidine kinase. | Response regulator TutC. | 0.994 |
fixL | lpg2180 | lpg0278 | lpg2180 | Sensor histidine kinase. | Sensory box histidine kinase/response regulator. | 0.994 |
fixL | lpg2181 | lpg0278 | lpg2181 | Sensor histidine kinase. | Sensory box sensor histidine kinase/response regulator, putative. | 0.991 |
page 1 of 6