STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg1905Ectonucleoside triphosphate diphosphohydrolase I. (393 aa)    
Predicted Functional Partners:
lvrA-2
LvrA.
  
     0.728
lpg2586
Cysteine protease, papain C1 family.
  
     0.720
lvrA-3
LvrA.
  
     0.716
sec7
Guanine nucleotide exchange protein.
  
     0.707
lpg2622
Hypothetical protein.
  
     0.696
dotA
DotA.
  
     0.676
lpg0541
Probable membrane protein YdgA-like.
  
     0.675
lpg2927
Hypothetical protein.
  
     0.672
icmF
IcmF.
  
     0.663
lvrA
LvrA.
  
     0.656
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.