Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
lin0982 | lin1889 | gene:17565312 | gene:17566247 | Similar to glutathione peroxidase. | Lin1889 protein. | 0.452 |
lin1817 | lin1889 | gene:17566172 | gene:17566247 | Lin1817 protein; Similar to deoxyguanosine kinase/deoxyadenosine kinase(I) subunit. | Lin1889 protein. | 0.514 |
lin1889 | lin0982 | gene:17566247 | gene:17565312 | Lin1889 protein. | Similar to glutathione peroxidase. | 0.452 |
lin1889 | lin1817 | gene:17566247 | gene:17566172 | Lin1889 protein. | Lin1817 protein; Similar to deoxyguanosine kinase/deoxyadenosine kinase(I) subunit. | 0.514 |
lin1889 | lin1890 | gene:17566247 | gene:17566248 | Lin1889 protein. | Lin1890 protein; Similar to ABC transporter (ATP-binding protein). | 0.567 |
lin1889 | lin1891 | gene:17566247 | gene:17566249 | Lin1889 protein. | Lin1891 protein. | 0.450 |
lin1889 | motB | gene:17566247 | gene:17565021 | Lin1889 protein. | MotB protein; Similar to motility protein (flagellar motor rotation) MotB. | 0.405 |
lin1889 | pnpA | gene:17566247 | gene:17565699 | Lin1889 protein. | Polynucleotide phosphorylase (PNPase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.417 |
lin1890 | lin1889 | gene:17566248 | gene:17566247 | Lin1890 protein; Similar to ABC transporter (ATP-binding protein). | Lin1889 protein. | 0.567 |
lin1890 | lin1891 | gene:17566248 | gene:17566249 | Lin1890 protein; Similar to ABC transporter (ATP-binding protein). | Lin1891 protein. | 0.625 |
lin1891 | lin1889 | gene:17566249 | gene:17566247 | Lin1891 protein. | Lin1889 protein. | 0.450 |
lin1891 | lin1890 | gene:17566249 | gene:17566248 | Lin1891 protein. | Lin1890 protein; Similar to ABC transporter (ATP-binding protein). | 0.625 |
motB | lin1889 | gene:17565021 | gene:17566247 | MotB protein; Similar to motility protein (flagellar motor rotation) MotB. | Lin1889 protein. | 0.405 |
pnpA | lin1889 | gene:17565699 | gene:17566247 | Polynucleotide phosphorylase (PNPase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Lin1889 protein. | 0.417 |