STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin2199Similar to 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (310 aa)    
Predicted Functional Partners:
lin0377
Lin0377 protein; Similar to PTS system, fructose-specific enzyme IIBC component.
 
 
 0.997
fruA
FruA protein; Highly similar to phosphotransferase system (PTS) fructose-specific enzyme IIABC component.
 
 
 0.997
lin0422
Lin0422 protein; Similar to fructose-specific phosphotransferase enzyme IIB.
 
 
 0.940
lin0448
Lin0448 protein; Similar to PTS fructose-specific enzyme IIC component.
 
 
 0.937
lin2241
Lin2241 protein; Similar to PTS system, fructose-specific enzyme IIB component.
 
 
 0.936
lin2240
Lin2240 protein; Similar to PTS system, fructose-specific enzyme IIC component.
 
 
 0.934
lin0423
Lin0423 protein; Similar to fructose-specific phosphotransferase enzyme IIC.
 
 
 0.931
fruB
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 
0.928
lin0378
Lin0378 protein; Similar to D-fructose-1,6-biphosphate aldolase.
  
 
 0.922
lin2238
Lin2238 protein; Similar to fructose-1,6-biphosphate aldolase type II.
  
 
 0.922
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.