Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cysE | hom | gene:17564597 | gene:17567071 | Similar to serine O-acetyltransferase. | Highly similar to homoserine dehydrogenase. | 0.854 |
cysE | lin1786 | gene:17564597 | gene:17566117 | Similar to serine O-acetyltransferase. | Lin1786 protein; Similar to 5-methyltetrahydrofolate-homocysteine methyltransferase (metH). | 0.502 |
cysE | lin1787 | gene:17564597 | gene:17566118 | Similar to serine O-acetyltransferase. | Lin1787 protein; Similar to cystathionine beta-lyase. | 0.456 |
cysE | lin1788 | gene:17564597 | gene:17566119 | Similar to serine O-acetyltransferase. | Lin1788 protein; Similar to cystathionine gamma-synthase. | 0.456 |
cysE | lin1926 | gene:17564597 | gene:17566284 | Similar to serine O-acetyltransferase. | Similar to L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.910 |
cysE | lin1927 | gene:17564597 | gene:17566285 | Similar to serine O-acetyltransferase. | L-serine dehydratase; Similar to phosphoglycerate dehydrogenase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.910 |
cysE | thrB | gene:17564597 | gene:17567069 | Similar to serine O-acetyltransferase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.834 |
hom | cysE | gene:17567071 | gene:17564597 | Highly similar to homoserine dehydrogenase. | Similar to serine O-acetyltransferase. | 0.854 |
hom | lin0977 | gene:17567071 | gene:17565307 | Highly similar to homoserine dehydrogenase. | Similar to branched-chain amino acid aminotransferase. | 0.887 |
hom | lin1786 | gene:17567071 | gene:17566117 | Highly similar to homoserine dehydrogenase. | Lin1786 protein; Similar to 5-methyltetrahydrofolate-homocysteine methyltransferase (metH). | 0.958 |
hom | lin1787 | gene:17567071 | gene:17566118 | Highly similar to homoserine dehydrogenase. | Lin1787 protein; Similar to cystathionine beta-lyase. | 0.887 |
hom | lin1788 | gene:17567071 | gene:17566119 | Highly similar to homoserine dehydrogenase. | Lin1788 protein; Similar to cystathionine gamma-synthase. | 0.887 |
hom | lin1926 | gene:17567071 | gene:17566284 | Highly similar to homoserine dehydrogenase. | Similar to L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.825 |
hom | lin1927 | gene:17567071 | gene:17566285 | Highly similar to homoserine dehydrogenase. | L-serine dehydratase; Similar to phosphoglycerate dehydrogenase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.825 |
hom | thrB | gene:17567071 | gene:17567069 | Highly similar to homoserine dehydrogenase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.999 |
hom | thrC | gene:17567071 | gene:17567070 | Highly similar to homoserine dehydrogenase. | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.996 |
lin0977 | hom | gene:17565307 | gene:17567071 | Similar to branched-chain amino acid aminotransferase. | Highly similar to homoserine dehydrogenase. | 0.887 |
lin0977 | lin1786 | gene:17565307 | gene:17566117 | Similar to branched-chain amino acid aminotransferase. | Lin1786 protein; Similar to 5-methyltetrahydrofolate-homocysteine methyltransferase (metH). | 0.534 |
lin0977 | lin1788 | gene:17565307 | gene:17566119 | Similar to branched-chain amino acid aminotransferase. | Lin1788 protein; Similar to cystathionine gamma-synthase. | 0.916 |
lin0977 | thrB | gene:17565307 | gene:17567069 | Similar to branched-chain amino acid aminotransferase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.865 |
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