STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
lin2907Beta-glucoside kinase; Catalyzes the ATP-dependent phosphorylation of cellobiose to produce cellobiose-6'-P. May have a dual role of kinase and transcriptional regulator of the cellobiose-PTS operon. Belongs to the ROK (NagC/XylR) family. (294 aa)    
Predicted Functional Partners:
lin0026
Lin0026 protein; Similar to PTS system, beta-glucosides specific enzyme IIABC.
  
 
 0.942
lin2906
Permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 0.913
lin1223
Lin1223 protein; Similar to PTS system trehalose specific enzyme IIBC.
  
 
 0.902
lin2905
Lin2905 protein; Similar to PTS cellobiose-specific enzyme IIB.
  
  
 0.878
lin2908
Lin2908 protein; Similar to PTS cellobiose-specific enzyme IIA.
  
  
 0.803
lin2122
Lin2122 protein; Similar to putative sugar hydrolases.
  
  
 0.626
lin2123
Lin2123 protein; Similar to alpha-mannosidase.
  
  
 0.626
lin1606
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
     
 0.596
lin2904
Lin2904 protein; Similar to beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.576
pykA
Highly similar to pyruvate kinases.
 
   
 0.527
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.