STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS39136.1Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (340 aa)    
Predicted Functional Partners:
ACS39137.1
Putative tripartite ATP-independent periplasmic transporter, permease (DctQ) subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.980
ACS39138.1
Putative tripartite ATP-independent periplasmic transporter, putative membrane component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.966
ACS39880.1
Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.966
ACS39135.1
Transcriptional regulator, GntR family; Function of strongly homologous gene; regulator.
 
     0.751
matA
malonyl-CoA decarboxylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.552
ACS40278.1
Putative extracellular solute-binding protein family 7, twin-arginine translocation pathway signal; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 0.472
ACS39139.1
Hypothetical protein; No homology to any previously reported sequences.
       0.463
ACS37994.1
Transcriptional regulator, GntR family; Function of strongly homologous gene; regulator.
 
     0.415
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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