STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
croRCrotonase; Involved in the regeneration of glyoxylate from a molecule of acetyl-CoA. (157 aa)    
Predicted Functional Partners:
ccr
crotonyl-CoA carboxylase/reductase; Function experimentally demonstrated in the studied strain; enzyme.
 
 0.977
phaB
acetoacetyl-CoA reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.977
ACS41189.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.965
phaC
Polyhydroxyalkanoate synthase subunit PhaC; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.963
ACS42125.1
acyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme.
 
 0.944
ACS42261.1
Putative enoyl-CoA hydratase/isomerase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.940
pta
Phosphate acetyltransferase; Function of strongly homologous gene; enzyme.
 
   
 0.921
phaA
Beta-ketothiolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.866
ibd2
isobutyryl-CoA dehydrogenase; Function experimentally demonstrated in the studied strain; enzyme.
 
 0.853
croA
3-hydroxybutyryl-CoA dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.798
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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