STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ACS42552.1Putative nitrate transporter component, nrtA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (338 aa)    
Predicted Functional Partners:
ACS42553.1
Two-component response regulator; Function of strongly homologous gene; regulator.
 
  
 0.958
ntrCD
Nitrate transport ATP-binding subunits C and D; Function of strongly homologous gene; transporter.
  
 0.956
nrtC
Nitrate transport system ATP-binding protein; Function of strongly homologous gene; transporter.
  
 0.931
nrtB-2
Nitrate transport permease protein; Function of strongly homologous gene; transporter.
  
 0.888
ACS42548.1
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.840
nrtB
Nitrate transport system permease protein; Function of strongly homologous gene; transporter.
  
 0.821
nasA
Nitrate reductase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.820
ACS41753.1
ABC transporter, ATPase; Function of strongly homologous gene; transporter.
  
 0.776
ACS39495.1
Putative ATP-binding component of ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.684
tauB
Taurine transport protein (ABC superfamily, atp_bind); Function of strongly homologous gene; transporter.
  
 0.630
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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